dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00219
Location and strand information: 258291 - 260252 (-)
Family: 9.B.14.3.1
Protein type: TC
Protein description: Cytochrome c biogenesis protein CcsA

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00220
Location and strand information: 260566 - 262038 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7427
Protein molecular weight: 53986.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00221
Location and strand information: 262234 - 265122 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.5235
Protein molecular weight: 109640.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00222
Location and strand information: 265148 - 266635 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6317
Protein molecular weight: 54967.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00223
Location and strand information: 266779 - 269694 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.7144
Protein molecular weight: 110326.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00224
Location and strand information: 269909 - 272818 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.327
Protein molecular weight: 109634.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00225
Location and strand information: 273138 - 273896 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.6218
Protein molecular weight: 25962.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00226
Location and strand information: 273937 - 275430 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9174
Protein molecular weight: 55009.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00227
Location and strand information: 275437 - 276912 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2646
Protein molecular weight: 54113.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00228
Location and strand information: 277026 - 277517 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00229
Location and strand information: 277510 - 279906 (-)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3626
Protein molecular weight: 90167.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00230
Location and strand information: 280287 - 280388 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00231
Location and strand information: 280683 - 283802 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.4416
Protein molecular weight: 116393.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00232
Location and strand information: 284114 - 285328 (+)
Family: 2.A.6.2.45
Protein type: TC
Protein description: Multidrug resistance protein MdtE

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00233
Location and strand information: 285352 - 288522 (+)
Family: 2.A.6.2.22
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00234
Location and strand information: 288559 - 290043 (+)
Family: 1.B.17.3.5
Protein type: TC
Protein description: Cation efflux system protein CusC

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00235
Location and strand information: 290479 - 291354 (-)
Family: 3.A.2.1.7
Protein type: TC
Protein description: ATP synthase gamma chain

Gene clsuter ID: MGYG000001385_1|CGC3
Gene ID: MGYG000001385_00236
Location and strand information: 291358 - 292938 (-)
Family: 3.A.2.1.7
Protein type: TC
Protein description: ATP synthase subunit alpha

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001385_00219	Cytochrome c biogenesis protein CcsA	TC	258291	260252	-	9.B.14.3.1
MGYG000001385_00220	hypothetical protein	CAZyme	260566	262038	-	GH28
MGYG000001385_00221	hypothetical protein	CAZyme	262234	265122	-	GH106
MGYG000001385_00222	hypothetical protein	CAZyme	265148	266635	-	GH28
MGYG000001385_00223	hypothetical protein	CAZyme	266779	269694	-	GH106
MGYG000001385_00224	hypothetical protein	CAZyme	269909	272818	-	GH106
MGYG000001385_00225	hypothetical protein	CAZyme	273138	273896	-	GH28
MGYG000001385_00226	hypothetical protein	CAZyme	273937	275430	-	GH28
MGYG000001385_00227	hypothetical protein	CAZyme	275437	276912	-	GH28
MGYG000001385_00228	hypothetical protein	null	277026	277517	-	Glyco_hydro_2_N
MGYG000001385_00229	hypothetical protein	CAZyme	277510	279906	-	GH106
MGYG000001385_00230	hypothetical protein	null	280287	280388	-	No domain
MGYG000001385_00231	Beta-galactosidase	CAZyme	280683	283802	+	GH2
MGYG000001385_00232	Multidrug resistance protein MdtE	TC	284114	285328	+	2.A.6.2.45
MGYG000001385_00233	Efflux pump membrane transporter BepE	TC	285352	288522	+	2.A.6.2.22
MGYG000001385_00234	Cation efflux system protein CusC	TC	288559	290043	+	1.B.17.3.5
MGYG000001385_00235	ATP synthase gamma chain	TC	290479	291354	-	3.A.2.1.7
MGYG000001385_00236	ATP synthase subunit alpha	TC	291358	292938	-	3.A.2.1.7
Protein ID	Protein Name	Type	Start	End	Strand	Signature